Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn3Q9ES97 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn3Q9ES97 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn3Q9ES97 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn3Q9ES97 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Idnk-204ENSMUST00000226010 1898 ntBASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn3Q9ES97 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rtn3Q9ES97 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.64■□□□□ 0.58
Rtn3Q9ES97 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Rtn3Q9ES97 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Gm11249-201ENSMUST00000117071 859 ntBASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn3Q9ES97 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn3Q9ES97 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.62■□□□□ 0.57
Rtn3Q9ES97 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtn3Q9ES97 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtn3Q9ES97 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtn3Q9ES97 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtn3Q9ES97 Gm13158-201ENSMUST00000122007 736 ntBASIC18.61■□□□□ 0.57
Rtn3Q9ES97 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Rtn3Q9ES97 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtn3Q9ES97 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms