Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Gm10013-201ENSMUST00000106074 672 ntBASIC18.95■□□□□ 0.62
Trim54Q9ERP3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Gm29791-202ENSMUST00000207888 369 ntBASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Gm7367-201ENSMUST00000057611 492 ntBASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trim54Q9ERP3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Gm7638-201ENSMUST00000121348 967 ntBASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Gm10819-201ENSMUST00000099988 561 ntBASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim54Q9ERP3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim54Q9ERP3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Fst-202ENSMUST00000223640 2612 ntBASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim54Q9ERP3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms