Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Hmgn3Q9DCB1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Mir7075-201ENSMUST00000184187 82 ntBASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmgn3Q9DCB1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.46■□□□□ 0.23
Hmgn3Q9DCB1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Gm11421-201ENSMUST00000122124 294 ntBASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmgn3Q9DCB1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgn3Q9DCB1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgn3Q9DCB1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgn3Q9DCB1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Hmgn3Q9DCB1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgn3Q9DCB1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgn3Q9DCB1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgn3Q9DCB1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgn3Q9DCB1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgn3Q9DCB1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgn3Q9DCB1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgn3Q9DCB1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmgn3Q9DCB1 Gm12821-201ENSMUST00000120022 600 ntBASIC16.44■□□□□ 0.22
Hmgn3Q9DCB1 Smad6-203ENSMUST00000179458 273 ntBASIC16.44■□□□□ 0.22
Hmgn3Q9DCB1 Gm43173-201ENSMUST00000202246 593 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms