Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp5Q9D7S9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.95■■□□□ 1.1
Chmp5Q9D7S9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp5Q9D7S9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp5Q9D7S9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp5Q9D7S9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp5Q9D7S9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Chmp5Q9D7S9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp5Q9D7S9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Chmp5Q9D7S9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Chmp5Q9D7S9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chmp5Q9D7S9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Chmp5Q9D7S9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Chmp5Q9D7S9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Chmp5Q9D7S9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chmp5Q9D7S9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Chmp5Q9D7S9 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.94■■□□□ 1.1
Chmp5Q9D7S9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Chmp5Q9D7S9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.94■■□□□ 1.1
Chmp5Q9D7S9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chmp5Q9D7S9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Chmp5Q9D7S9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Chmp5Q9D7S9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp5Q9D7S9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp5Q9D7S9 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.93■■□□□ 1.1
Chmp5Q9D7S9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp5Q9D7S9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp5Q9D7S9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp5Q9D7S9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp5Q9D7S9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp5Q9D7S9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp5Q9D7S9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Chmp5Q9D7S9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Chmp5Q9D7S9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC21.92■■□□□ 1.1
Chmp5Q9D7S9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.92■■□□□ 1.1
Chmp5Q9D7S9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Chmp5Q9D7S9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Chmp5Q9D7S9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Chmp5Q9D7S9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp5Q9D7S9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Chmp5Q9D7S9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Chmp5Q9D7S9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp5Q9D7S9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp5Q9D7S9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp5Q9D7S9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Chmp5Q9D7S9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Chmp5Q9D7S9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Chmp5Q9D7S9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Chmp5Q9D7S9 Gm45774-201ENSMUST00000211992 2665 ntBASIC21.91■■□□□ 1.1
Chmp5Q9D7S9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.91■■□□□ 1.1
Chmp5Q9D7S9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp5Q9D7S9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp5Q9D7S9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp5Q9D7S9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp5Q9D7S9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Chmp5Q9D7S9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Chmp5Q9D7S9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
Chmp5Q9D7S9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp5Q9D7S9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp5Q9D7S9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp5Q9D7S9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.9■■□□□ 1.1
Chmp5Q9D7S9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp5Q9D7S9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
Chmp5Q9D7S9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Chmp5Q9D7S9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Chmp5Q9D7S9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Gm15743-202ENSMUST00000182690 1901 ntBASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Gm38285-201ENSMUST00000192928 922 ntBASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Chmp5Q9D7S9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Mir8112-201ENSMUST00000184382 131 ntBASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Gm29791-202ENSMUST00000207888 369 ntBASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp5Q9D7S9 Shroom3-211ENSMUST00000225438 5742 ntBASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms