Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap53Q9D439 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap53Q9D439 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap53Q9D439 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap53Q9D439 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap53Q9D439 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap53Q9D439 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap53Q9D439 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap53Q9D439 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.23■□□□□ 0.67
Cfap53Q9D439 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.23■□□□□ 0.67
Cfap53Q9D439 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap53Q9D439 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap53Q9D439 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap53Q9D439 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cfap53Q9D439 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap53Q9D439 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap53Q9D439 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.23■□□□□ 0.67
Cfap53Q9D439 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap53Q9D439 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Gm18666-201ENSMUST00000190039 958 ntBASIC19.21■□□□□ 0.67
Cfap53Q9D439 Gm37856-201ENSMUST00000191634 999 ntBASIC19.21■□□□□ 0.67
Cfap53Q9D439 Gm8969-201ENSMUST00000199694 526 ntBASIC19.21■□□□□ 0.67
Cfap53Q9D439 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap53Q9D439 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.2■□□□□ 0.66
Cfap53Q9D439 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap53Q9D439 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap53Q9D439 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap53Q9D439 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap53Q9D439 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap53Q9D439 Gm12527-201ENSMUST00000117967 564 ntBASIC19.2■□□□□ 0.66
Cfap53Q9D439 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap53Q9D439 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Cfap53Q9D439 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap53Q9D439 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cfap53Q9D439 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cfap53Q9D439 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cfap53Q9D439 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cfap53Q9D439 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.19■□□□□ 0.66
Cfap53Q9D439 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cfap53Q9D439 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cfap53Q9D439 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cfap53Q9D439 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cfap53Q9D439 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cfap53Q9D439 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cfap53Q9D439 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.18■□□□□ 0.66
Cfap53Q9D439 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cfap53Q9D439 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cfap53Q9D439 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cfap53Q9D439 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cfap53Q9D439 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.18■□□□□ 0.66
Cfap53Q9D439 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Cfap53Q9D439 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cfap53Q9D439 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cfap53Q9D439 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.18■□□□□ 0.66
Cfap53Q9D439 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.18■□□□□ 0.66
Cfap53Q9D439 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cfap53Q9D439 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.18■□□□□ 0.66
Cfap53Q9D439 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cfap53Q9D439 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cfap53Q9D439 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cfap53Q9D439 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cfap53Q9D439 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms