Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf2a1Q99PM3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Gm11599-201ENSMUST00000118720 878 ntBASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gtf2a1Q99PM3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Gtf2a1Q99PM3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf2a1Q99PM3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gtf2a1Q99PM3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gtf2a1Q99PM3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gtf2a1Q99PM3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf2a1Q99PM3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf2a1Q99PM3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.39■□□□□ 0.69
Gtf2a1Q99PM3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Gtf2a1Q99PM3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf2a1Q99PM3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf2a1Q99PM3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf2a1Q99PM3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf2a1Q99PM3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2a1Q99PM3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.38■□□□□ 0.69
Gtf2a1Q99PM3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2a1Q99PM3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2a1Q99PM3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.38■□□□□ 0.69
Gtf2a1Q99PM3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gtf2a1Q99PM3 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.38■□□□□ 0.69
Gtf2a1Q99PM3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC19.38■□□□□ 0.69
Gtf2a1Q99PM3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.38■□□□□ 0.69
Gtf2a1Q99PM3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2a1Q99PM3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2a1Q99PM3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2a1Q99PM3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC19.38■□□□□ 0.69
Gtf2a1Q99PM3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2a1Q99PM3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf2a1Q99PM3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gtf2a1Q99PM3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms