Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hps4Q99KG7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hps4Q99KG7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hps4Q99KG7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
Hps4Q99KG7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.6■□□□□ 0.89
Hps4Q99KG7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hps4Q99KG7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hps4Q99KG7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hps4Q99KG7 Il3ra-202ENSMUST00000223589 738 ntBASIC20.6■□□□□ 0.89
Hps4Q99KG7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hps4Q99KG7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hps4Q99KG7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hps4Q99KG7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hps4Q99KG7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hps4Q99KG7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hps4Q99KG7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Hps4Q99KG7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hps4Q99KG7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Hps4Q99KG7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hps4Q99KG7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.59■□□□□ 0.89
Hps4Q99KG7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Hps4Q99KG7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hps4Q99KG7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hps4Q99KG7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hps4Q99KG7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hps4Q99KG7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Hps4Q99KG7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hps4Q99KG7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hps4Q99KG7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hps4Q99KG7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hps4Q99KG7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hps4Q99KG7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Hps4Q99KG7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hps4Q99KG7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hps4Q99KG7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Hps4Q99KG7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.57■□□□□ 0.88
Hps4Q99KG7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hps4Q99KG7 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.57■□□□□ 0.88
Hps4Q99KG7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Hps4Q99KG7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hps4Q99KG7 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.56■□□□□ 0.88
Hps4Q99KG7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Hps4Q99KG7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hps4Q99KG7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hps4Q99KG7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.56■□□□□ 0.88
Hps4Q99KG7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.56■□□□□ 0.88
Hps4Q99KG7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hps4Q99KG7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hps4Q99KG7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hps4Q99KG7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.56■□□□□ 0.88
Hps4Q99KG7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hps4Q99KG7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Hps4Q99KG7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hps4Q99KG7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hps4Q99KG7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hps4Q99KG7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hps4Q99KG7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hps4Q99KG7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.55■□□□□ 0.88
Hps4Q99KG7 Gm33142-201ENSMUST00000193913 867 ntBASIC20.55■□□□□ 0.88
Hps4Q99KG7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hps4Q99KG7 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.55■□□□□ 0.88
Hps4Q99KG7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hps4Q99KG7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.55■□□□□ 0.88
Hps4Q99KG7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hps4Q99KG7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hps4Q99KG7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.54■□□□□ 0.88
Hps4Q99KG7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Hps4Q99KG7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hps4Q99KG7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms