Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb2Q91Y00 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Mir6982-201ENSMUST00000184354 68 ntBASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb2Q91Y00 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb2Q91Y00 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 Gm10517-202ENSMUST00000192970 758 ntBASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb2Q91Y00 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb2Q91Y00 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms