Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40bQ8VHP8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Rab40bQ8VHP8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Mir8112-201ENSMUST00000184382 131 ntBASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rab40bQ8VHP8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rab40bQ8VHP8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40bQ8VHP8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40bQ8VHP8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40bQ8VHP8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.77■□□□□ 0.12
Rab40bQ8VHP8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Rab40bQ8VHP8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40bQ8VHP8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40bQ8VHP8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40bQ8VHP8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40bQ8VHP8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rab40bQ8VHP8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40bQ8VHP8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Rab40bQ8VHP8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rab40bQ8VHP8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rab40bQ8VHP8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40bQ8VHP8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms