Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.65■□□□□ 0.74
Ushbp1Q8R370 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.65■□□□□ 0.74
Ushbp1Q8R370 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.65■□□□□ 0.74
Ushbp1Q8R370 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ushbp1Q8R370 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ushbp1Q8R370 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ushbp1Q8R370 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ushbp1Q8R370 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ushbp1Q8R370 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ushbp1Q8R370 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ushbp1Q8R370 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Mtag2-201ENSMUST00000058665 714 ntBASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ushbp1Q8R370 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Mir2861-201ENSMUST00000175539 82 ntBASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Gm29791-202ENSMUST00000207888 369 ntBASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ushbp1Q8R370 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ushbp1Q8R370 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Mir5122-201ENSMUST00000175004 89 ntBASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ushbp1Q8R370 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.61■□□□□ 0.73
Ushbp1Q8R370 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Gm5417-201ENSMUST00000079706 384 ntBASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms