Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubqln1Q8R317 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Gm11643-201ENSMUST00000119578 864 ntBASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Gm8969-201ENSMUST00000199694 526 ntBASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.61■□□□□ 0.25
Ubqln1Q8R317 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Gm20760-201ENSMUST00000179197 648 ntBASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubqln1Q8R317 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln1Q8R317 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubqln1Q8R317 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubqln1Q8R317 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubqln1Q8R317 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ubqln1Q8R317 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.58■□□□□ 0.25
Ubqln1Q8R317 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ubqln1Q8R317 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubqln1Q8R317 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Ubqln1Q8R317 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Ubqln1Q8R317 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln1Q8R317 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln1Q8R317 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln1Q8R317 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ubqln1Q8R317 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln1Q8R317 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln1Q8R317 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln1Q8R317 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln1Q8R317 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln1Q8R317 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln1Q8R317 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln1Q8R317 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln1Q8R317 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln1Q8R317 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms