Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc59Q8R2N0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Gm38205-201ENSMUST00000192243 258 ntBASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc59Q8R2N0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc59Q8R2N0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccdc59Q8R2N0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc59Q8R2N0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc59Q8R2N0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc59Q8R2N0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc59Q8R2N0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc59Q8R2N0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc59Q8R2N0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc59Q8R2N0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc59Q8R2N0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc59Q8R2N0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc59Q8R2N0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc59Q8R2N0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc59Q8R2N0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc59Q8R2N0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc59Q8R2N0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Ccdc59Q8R2N0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc59Q8R2N0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.58■□□□□ 0.25
Ccdc59Q8R2N0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Ccdc59Q8R2N0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc59Q8R2N0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc59Q8R2N0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms