Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIMC1Q8NDZ2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.02■□□□□ 0.64
SIMC1Q8NDZ2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.02■□□□□ 0.64
SIMC1Q8NDZ2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIMC1Q8NDZ2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SIMC1Q8NDZ2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.02■□□□□ 0.64
SIMC1Q8NDZ2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.02■□□□□ 0.64
SIMC1Q8NDZ2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.02■□□□□ 0.64
SIMC1Q8NDZ2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIMC1Q8NDZ2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIMC1Q8NDZ2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SIMC1Q8NDZ2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.02■□□□□ 0.63
SIMC1Q8NDZ2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SIMC1Q8NDZ2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SIMC1Q8NDZ2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SIMC1Q8NDZ2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SIMC1Q8NDZ2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SIMC1Q8NDZ2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 AL512408.1-201ENST00000569378 2000 ntBASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIMC1Q8NDZ2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 KRT8P36-201ENST00000489121 1440 ntBASIC19■□□□□ 0.63
SIMC1Q8NDZ2 AC010980.2-201ENST00000587099 1412 ntBASIC19■□□□□ 0.63
SIMC1Q8NDZ2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 MAP2K4P1-201ENST00000438453 1195 ntBASIC19■□□□□ 0.63
SIMC1Q8NDZ2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 AC069236.1-201ENST00000604339 616 ntBASIC19■□□□□ 0.63
SIMC1Q8NDZ2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19■□□□□ 0.63
SIMC1Q8NDZ2 OR10C1-204ENST00000622521 1039 ntBASIC19■□□□□ 0.63
SIMC1Q8NDZ2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIMC1Q8NDZ2 AC087633.2-202ENST00000565166 1439 ntBASIC19■□□□□ 0.63
SIMC1Q8NDZ2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIMC1Q8NDZ2 GABARAPL3-202ENST00000624044 1851 ntBASIC18.99■□□□□ 0.63
SIMC1Q8NDZ2 PCDHAC2-203ENST00000615316 3011 ntBASIC18.99■□□□□ 0.63
SIMC1Q8NDZ2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.99■□□□□ 0.63
SIMC1Q8NDZ2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.99■□□□□ 0.63
SIMC1Q8NDZ2 AC133552.2-202ENST00000575694 574 ntBASIC18.99■□□□□ 0.63
SIMC1Q8NDZ2 AC008694.1-202ENST00000636953 945 ntBASIC18.99■□□□□ 0.63
SIMC1Q8NDZ2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.99■□□□□ 0.63
SIMC1Q8NDZ2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SIMC1Q8NDZ2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.99■□□□□ 0.63
SIMC1Q8NDZ2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIMC1Q8NDZ2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
SIMC1Q8NDZ2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.99■□□□□ 0.63
SIMC1Q8NDZ2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIMC1Q8NDZ2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 AC006970.2-201ENST00000450065 779 ntBASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 AC105036.2-201ENST00000569468 176 ntBASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.98■□□□□ 0.63
SIMC1Q8NDZ2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms