Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc2Q8CG48 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
Smc2Q8CG48 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc2Q8CG48 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Smc2Q8CG48 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc2Q8CG48 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smc2Q8CG48 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc2Q8CG48 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc2Q8CG48 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc2Q8CG48 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Smc2Q8CG48 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.07■□□□□ 0.8
Smc2Q8CG48 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smc2Q8CG48 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc2Q8CG48 Mtag2-201ENSMUST00000058665 714 ntBASIC20.07■□□□□ 0.8
Smc2Q8CG48 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Smc2Q8CG48 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Smc2Q8CG48 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc2Q8CG48 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.07■□□□□ 0.8
Smc2Q8CG48 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc2Q8CG48 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc2Q8CG48 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc2Q8CG48 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.06■□□□□ 0.8
Smc2Q8CG48 Gm12896-201ENSMUST00000118430 226 ntBASIC20.06■□□□□ 0.8
Smc2Q8CG48 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.06■□□□□ 0.8
Smc2Q8CG48 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smc2Q8CG48 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.06■□□□□ 0.8
Smc2Q8CG48 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc2Q8CG48 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc2Q8CG48 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smc2Q8CG48 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Smc2Q8CG48 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc2Q8CG48 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc2Q8CG48 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc2Q8CG48 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Smc2Q8CG48 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smc2Q8CG48 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Smc2Q8CG48 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc2Q8CG48 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc2Q8CG48 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc2Q8CG48 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smc2Q8CG48 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.05■□□□□ 0.8
Smc2Q8CG48 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.05■□□□□ 0.8
Smc2Q8CG48 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc2Q8CG48 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc2Q8CG48 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.05■□□□□ 0.8
Smc2Q8CG48 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc2Q8CG48 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Smc2Q8CG48 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.04■□□□□ 0.8
Smc2Q8CG48 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Smc2Q8CG48 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.04■□□□□ 0.8
Smc2Q8CG48 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc2Q8CG48 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc2Q8CG48 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
Smc2Q8CG48 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smc2Q8CG48 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc2Q8CG48 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc2Q8CG48 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc2Q8CG48 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smc2Q8CG48 Gm11643-201ENSMUST00000119578 864 ntBASIC20.02■□□□□ 0.8
Smc2Q8CG48 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.02■□□□□ 0.8
Smc2Q8CG48 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc2Q8CG48 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.02■□□□□ 0.8
Smc2Q8CG48 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc2Q8CG48 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc2Q8CG48 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Smc2Q8CG48 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc2Q8CG48 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc2Q8CG48 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Smc2Q8CG48 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smc2Q8CG48 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms