Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx30Q8CE50 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snx30Q8CE50 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Snx30Q8CE50 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snx30Q8CE50 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snx30Q8CE50 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snx30Q8CE50 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx30Q8CE50 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx30Q8CE50 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Snx30Q8CE50 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Snx30Q8CE50 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.08■□□□□ 0.48
Snx30Q8CE50 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snx30Q8CE50 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Snx30Q8CE50 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx30Q8CE50 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx30Q8CE50 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Snx30Q8CE50 Gm13158-201ENSMUST00000122007 736 ntBASIC18.07■□□□□ 0.48
Snx30Q8CE50 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.07■□□□□ 0.48
Snx30Q8CE50 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Snx30Q8CE50 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Snx30Q8CE50 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx30Q8CE50 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Snx30Q8CE50 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snx30Q8CE50 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx30Q8CE50 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.06■□□□□ 0.48
Snx30Q8CE50 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx30Q8CE50 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx30Q8CE50 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx30Q8CE50 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Snx30Q8CE50 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Snx30Q8CE50 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Snx30Q8CE50 Gm10138-203ENSMUST00000206952 366 ntBASIC18.06■□□□□ 0.48
Snx30Q8CE50 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.06■□□□□ 0.48
Snx30Q8CE50 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.06■□□□□ 0.48
Snx30Q8CE50 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx30Q8CE50 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snx30Q8CE50 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Snx30Q8CE50 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Snx30Q8CE50 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Gm20760-201ENSMUST00000179197 648 ntBASIC18.05■□□□□ 0.48
Snx30Q8CE50 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Snx30Q8CE50 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx30Q8CE50 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx30Q8CE50 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.04■□□□□ 0.48
Snx30Q8CE50 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.04■□□□□ 0.48
Snx30Q8CE50 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.04■□□□□ 0.48
Snx30Q8CE50 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Snx30Q8CE50 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx30Q8CE50 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx30Q8CE50 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.04■□□□□ 0.48
Snx30Q8CE50 Mir2861-201ENSMUST00000175539 82 ntBASIC18.04■□□□□ 0.48
Snx30Q8CE50 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx30Q8CE50 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.04■□□□□ 0.48
Snx30Q8CE50 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.04■□□□□ 0.48
Snx30Q8CE50 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx30Q8CE50 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Snx30Q8CE50 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx30Q8CE50 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Snx30Q8CE50 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx30Q8CE50 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snx30Q8CE50 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.03■□□□□ 0.48
Snx30Q8CE50 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.03■□□□□ 0.48
Snx30Q8CE50 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snx30Q8CE50 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snx30Q8CE50 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Snx30Q8CE50 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snx30Q8CE50 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Snx30Q8CE50 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snx30Q8CE50 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snx30Q8CE50 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snx30Q8CE50 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Snx30Q8CE50 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms