Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne3Q8BT60 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne3Q8BT60 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne3Q8BT60 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne3Q8BT60 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cpne3Q8BT60 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cpne3Q8BT60 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne3Q8BT60 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Cpne3Q8BT60 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne3Q8BT60 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne3Q8BT60 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cpne3Q8BT60 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cpne3Q8BT60 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne3Q8BT60 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne3Q8BT60 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Gm13148-201ENSMUST00000118892 745 ntBASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Gm44549-201ENSMUST00000208351 577 ntBASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne3Q8BT60 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.89■□□□□ 0.3
Cpne3Q8BT60 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cpne3Q8BT60 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.89■□□□□ 0.3
Cpne3Q8BT60 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cpne3Q8BT60 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.89■□□□□ 0.3
Cpne3Q8BT60 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cpne3Q8BT60 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms