Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Nod1Q8BHB0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nod1Q8BHB0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nod1Q8BHB0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nod1Q8BHB0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nod1Q8BHB0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nod1Q8BHB0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.43■□□□□ 0.54
Nod1Q8BHB0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nod1Q8BHB0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nod1Q8BHB0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nod1Q8BHB0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nod1Q8BHB0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nod1Q8BHB0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nod1Q8BHB0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Gm27389-201ENSMUST00000183622 195 ntBASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nod1Q8BHB0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nod1Q8BHB0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nod1Q8BHB0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nod1Q8BHB0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.4■□□□□ 0.54
Nod1Q8BHB0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.4■□□□□ 0.54
Nod1Q8BHB0 Gm27741-201ENSMUST00000185060 237 ntBASIC18.4■□□□□ 0.54
Nod1Q8BHB0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nod1Q8BHB0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nod1Q8BHB0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nod1Q8BHB0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nod1Q8BHB0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nod1Q8BHB0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nod1Q8BHB0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nod1Q8BHB0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nod1Q8BHB0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Nod1Q8BHB0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nod1Q8BHB0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nod1Q8BHB0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nod1Q8BHB0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nod1Q8BHB0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nod1Q8BHB0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nod1Q8BHB0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Nod1Q8BHB0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nod1Q8BHB0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nod1Q8BHB0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nod1Q8BHB0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nod1Q8BHB0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms