Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Trim50Q810I2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim50Q810I2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim50Q810I2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim50Q810I2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim50Q810I2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim50Q810I2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim50Q810I2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim50Q810I2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim50Q810I2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Gm10418-201ENSMUST00000100943 576 ntBASIC17.09■□□□□ 0.33
Trim50Q810I2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
Trim50Q810I2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Gm20760-201ENSMUST00000179197 648 ntBASIC17.09■□□□□ 0.33
Trim50Q810I2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim50Q810I2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim50Q810I2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Trim50Q810I2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim50Q810I2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim50Q810I2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim50Q810I2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim50Q810I2 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.08■□□□□ 0.32
Trim50Q810I2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim50Q810I2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim50Q810I2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim50Q810I2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trim50Q810I2 Gm5643-201ENSMUST00000117081 966 ntBASIC17.08■□□□□ 0.32
Trim50Q810I2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trim50Q810I2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.08■□□□□ 0.32
Trim50Q810I2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim50Q810I2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim50Q810I2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim50Q810I2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trim50Q810I2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.08■□□□□ 0.32
Trim50Q810I2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trim50Q810I2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trim50Q810I2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim50Q810I2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim50Q810I2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim50Q810I2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim50Q810I2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim50Q810I2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim50Q810I2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim50Q810I2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim50Q810I2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim50Q810I2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.07■□□□□ 0.32
Trim50Q810I2 Gm18025-201ENSMUST00000221733 862 ntBASIC17.07■□□□□ 0.32
Trim50Q810I2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim50Q810I2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim50Q810I2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim50Q810I2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim50Q810I2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim50Q810I2 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.07■□□□□ 0.32
Trim50Q810I2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim50Q810I2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim50Q810I2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trim50Q810I2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim50Q810I2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim50Q810I2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim50Q810I2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim50Q810I2 Gm13401-201ENSMUST00000117074 291 ntBASIC17.06■□□□□ 0.32
Trim50Q810I2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim50Q810I2 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.06■□□□□ 0.32
Trim50Q810I2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim50Q810I2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.06■□□□□ 0.32
Trim50Q810I2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim50Q810I2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim50Q810I2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim50Q810I2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim50Q810I2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim50Q810I2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim50Q810I2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim50Q810I2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim50Q810I2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim50Q810I2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.06■□□□□ 0.32
Trim50Q810I2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim50Q810I2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim50Q810I2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim50Q810I2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim50Q810I2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim50Q810I2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim50Q810I2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim50Q810I2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim50Q810I2 Gm11643-201ENSMUST00000119578 864 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms