Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CtifQ6PEE2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
CtifQ6PEE2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.71■□□□□ 0.59
CtifQ6PEE2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CtifQ6PEE2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CtifQ6PEE2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CtifQ6PEE2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CtifQ6PEE2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CtifQ6PEE2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CtifQ6PEE2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CtifQ6PEE2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.7■□□□□ 0.58
CtifQ6PEE2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CtifQ6PEE2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CtifQ6PEE2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.7■□□□□ 0.58
CtifQ6PEE2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CtifQ6PEE2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CtifQ6PEE2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CtifQ6PEE2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CtifQ6PEE2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CtifQ6PEE2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CtifQ6PEE2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CtifQ6PEE2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CtifQ6PEE2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CtifQ6PEE2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CtifQ6PEE2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CtifQ6PEE2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CtifQ6PEE2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CtifQ6PEE2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CtifQ6PEE2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CtifQ6PEE2 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.69■□□□□ 0.58
CtifQ6PEE2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CtifQ6PEE2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.69■□□□□ 0.58
CtifQ6PEE2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.68■□□□□ 0.58
CtifQ6PEE2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.68■□□□□ 0.58
CtifQ6PEE2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CtifQ6PEE2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CtifQ6PEE2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.67■□□□□ 0.58
CtifQ6PEE2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CtifQ6PEE2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CtifQ6PEE2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms