Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Kdm3aQ6PCM1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Kdm3aQ6PCM1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.17■□□□□ 0.98
Kdm3aQ6PCM1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Kdm3aQ6PCM1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Kdm3aQ6PCM1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Kdm3aQ6PCM1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Kdm3aQ6PCM1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.17■□□□□ 0.98
Kdm3aQ6PCM1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.17■□□□□ 0.98
Kdm3aQ6PCM1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Kdm3aQ6PCM1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Kdm3aQ6PCM1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Kdm3aQ6PCM1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Gm10231-201ENSMUST00000181584 441 ntBASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Gm10175-202ENSMUST00000208752 441 ntBASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm3aQ6PCM1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm3aQ6PCM1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm3aQ6PCM1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm3aQ6PCM1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.15■□□□□ 0.98
Kdm3aQ6PCM1 Gm2274-201ENSMUST00000184539 609 ntBASIC21.15■□□□□ 0.98
Kdm3aQ6PCM1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm3aQ6PCM1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm3aQ6PCM1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm3aQ6PCM1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm3aQ6PCM1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Kdm3aQ6PCM1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Kdm3aQ6PCM1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm3aQ6PCM1 Gm18959-201ENSMUST00000208954 655 ntBASIC21.14■□□□□ 0.97
Kdm3aQ6PCM1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm3aQ6PCM1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm3aQ6PCM1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Kdm3aQ6PCM1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm3aQ6PCM1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm3aQ6PCM1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm3aQ6PCM1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Kdm3aQ6PCM1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Kdm3aQ6PCM1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 Gm8969-201ENSMUST00000199694 526 ntBASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 Gm45058-201ENSMUST00000205810 766 ntBASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm3aQ6PCM1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Gm16061-201ENSMUST00000122167 857 ntBASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm3aQ6PCM1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Kdm3aQ6PCM1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms