Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rai1Q61818 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rai1Q61818 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rai1Q61818 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rai1Q61818 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rai1Q61818 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.93■□□□□ 0.3
Rai1Q61818 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rai1Q61818 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.93■□□□□ 0.3
Rai1Q61818 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.93■□□□□ 0.3
Rai1Q61818 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rai1Q61818 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rai1Q61818 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rai1Q61818 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Rai1Q61818 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rai1Q61818 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rai1Q61818 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rai1Q61818 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Rai1Q61818 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.92■□□□□ 0.3
Rai1Q61818 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.92■□□□□ 0.3
Rai1Q61818 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rai1Q61818 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.91■□□□□ 0.3
Rai1Q61818 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rai1Q61818 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rai1Q61818 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Rai1Q61818 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rai1Q61818 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.91■□□□□ 0.3
Rai1Q61818 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rai1Q61818 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rai1Q61818 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rai1Q61818 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rai1Q61818 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rai1Q61818 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.91■□□□□ 0.3
Rai1Q61818 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rai1Q61818 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rai1Q61818 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rai1Q61818 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rai1Q61818 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.91■□□□□ 0.3
Rai1Q61818 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rai1Q61818 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rai1Q61818 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.91■□□□□ 0.3
Rai1Q61818 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rai1Q61818 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
Rai1Q61818 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.9■□□□□ 0.3
Rai1Q61818 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.9■□□□□ 0.3
Rai1Q61818 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rai1Q61818 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rai1Q61818 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rai1Q61818 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.9■□□□□ 0.3
Rai1Q61818 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rai1Q61818 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rai1Q61818 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rai1Q61818 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rai1Q61818 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rai1Q61818 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.9■□□□□ 0.3
Rai1Q61818 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rai1Q61818 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rai1Q61818 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Rai1Q61818 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rai1Q61818 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rai1Q61818 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rai1Q61818 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rai1Q61818 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rai1Q61818 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rai1Q61818 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.89■□□□□ 0.29
Rai1Q61818 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Rai1Q61818 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rai1Q61818 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.89■□□□□ 0.29
Rai1Q61818 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rai1Q61818 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rai1Q61818 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rai1Q61818 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rai1Q61818 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms