Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clcn4Q61418 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clcn4Q61418 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clcn4Q61418 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Clcn4Q61418 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clcn4Q61418 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Clcn4Q61418 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.14■□□□□ 0.17
Clcn4Q61418 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Clcn4Q61418 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.14■□□□□ 0.17
Clcn4Q61418 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.14■□□□□ 0.17
Clcn4Q61418 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Gm20049-201ENSMUST00000219950 730 ntBASIC16.14■□□□□ 0.17
Clcn4Q61418 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.14■□□□□ 0.17
Clcn4Q61418 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Clcn4Q61418 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.14■□□□□ 0.17
Clcn4Q61418 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn4Q61418 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.14■□□□□ 0.17
Clcn4Q61418 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clcn4Q61418 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn4Q61418 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.13■□□□□ 0.17
Clcn4Q61418 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clcn4Q61418 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Clcn4Q61418 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Clcn4Q61418 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn4Q61418 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Clcn4Q61418 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clcn4Q61418 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn4Q61418 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn4Q61418 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.13■□□□□ 0.17
Clcn4Q61418 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clcn4Q61418 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Clcn4Q61418 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn4Q61418 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn4Q61418 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn4Q61418 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn4Q61418 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clcn4Q61418 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Clcn4Q61418 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.12■□□□□ 0.17
Clcn4Q61418 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.12■□□□□ 0.17
Clcn4Q61418 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Clcn4Q61418 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
Clcn4Q61418 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.12■□□□□ 0.17
Clcn4Q61418 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.12■□□□□ 0.17
Clcn4Q61418 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.12■□□□□ 0.17
Clcn4Q61418 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.12■□□□□ 0.17
Clcn4Q61418 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Clcn4Q61418 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn4Q61418 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.12■□□□□ 0.17
Clcn4Q61418 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.12■□□□□ 0.17
Clcn4Q61418 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn4Q61418 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Clcn4Q61418 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn4Q61418 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn4Q61418 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn4Q61418 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.11■□□□□ 0.17
Clcn4Q61418 Rab3c-203ENSMUST00000224180 967 ntBASIC16.11■□□□□ 0.17
Clcn4Q61418 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.11■□□□□ 0.17
Clcn4Q61418 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn4Q61418 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn4Q61418 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn4Q61418 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn4Q61418 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn4Q61418 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Clcn4Q61418 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn4Q61418 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn4Q61418 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn4Q61418 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms