Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sim2Q61079 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sim2Q61079 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sim2Q61079 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sim2Q61079 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
Sim2Q61079 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.08■□□□□ 0.33
Sim2Q61079 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sim2Q61079 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Sim2Q61079 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sim2Q61079 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sim2Q61079 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sim2Q61079 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sim2Q61079 Gm37025-201ENSMUST00000195159 829 ntBASIC17.08■□□□□ 0.32
Sim2Q61079 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sim2Q61079 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Sim2Q61079 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sim2Q61079 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sim2Q61079 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.08■□□□□ 0.32
Sim2Q61079 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sim2Q61079 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.08■□□□□ 0.32
Sim2Q61079 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sim2Q61079 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sim2Q61079 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sim2Q61079 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.07■□□□□ 0.32
Sim2Q61079 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.07■□□□□ 0.32
Sim2Q61079 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sim2Q61079 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.07■□□□□ 0.32
Sim2Q61079 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sim2Q61079 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.07■□□□□ 0.32
Sim2Q61079 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.07■□□□□ 0.32
Sim2Q61079 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Sim2Q61079 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.07■□□□□ 0.32
Sim2Q61079 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.07■□□□□ 0.32
Sim2Q61079 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim2Q61079 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.07■□□□□ 0.32
Sim2Q61079 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sim2Q61079 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sim2Q61079 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim2Q61079 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Sim2Q61079 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim2Q61079 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sim2Q61079 Gm13401-201ENSMUST00000117074 291 ntBASIC17.06■□□□□ 0.32
Sim2Q61079 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Sim2Q61079 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Sim2Q61079 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.06■□□□□ 0.32
Sim2Q61079 Gm45328-201ENSMUST00000210942 917 ntBASIC17.06■□□□□ 0.32
Sim2Q61079 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Sim2Q61079 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim2Q61079 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim2Q61079 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim2Q61079 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim2Q61079 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sim2Q61079 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim2Q61079 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sim2Q61079 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim2Q61079 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim2Q61079 Mir770-201ENSMUST00000103252 94 ntBASIC17.05■□□□□ 0.32
Sim2Q61079 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.05■□□□□ 0.32
Sim2Q61079 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim2Q61079 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sim2Q61079 Gm34391-201ENSMUST00000203706 907 ntBASIC17.05■□□□□ 0.32
Sim2Q61079 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim2Q61079 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim2Q61079 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim2Q61079 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim2Q61079 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sim2Q61079 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Sim2Q61079 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sim2Q61079 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim2Q61079 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sim2Q61079 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sim2Q61079 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim2Q61079 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.04■□□□□ 0.32
Sim2Q61079 Gm5864-201ENSMUST00000202263 970 ntBASIC17.04■□□□□ 0.32
Sim2Q61079 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sim2Q61079 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim2Q61079 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim2Q61079 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim2Q61079 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim2Q61079 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.04■□□□□ 0.32
Sim2Q61079 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim2Q61079 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sim2Q61079 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sim2Q61079 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sim2Q61079 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sim2Q61079 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms