Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Satb1Q60611 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Satb1Q60611 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.12■□□□□ 0.49
Satb1Q60611 Gm27704-201ENSMUST00000185094 107 ntBASIC18.12■□□□□ 0.49
Satb1Q60611 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.12■□□□□ 0.49
Satb1Q60611 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Satb1Q60611 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.12■□□□□ 0.49
Satb1Q60611 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Satb1Q60611 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Satb1Q60611 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Satb1Q60611 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.12■□□□□ 0.49
Satb1Q60611 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Satb1Q60611 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Satb1Q60611 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Satb1Q60611 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Satb1Q60611 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Satb1Q60611 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Satb1Q60611 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Satb1Q60611 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Satb1Q60611 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.11■□□□□ 0.49
Satb1Q60611 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Satb1Q60611 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.11■□□□□ 0.49
Satb1Q60611 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Satb1Q60611 Gm27463-201ENSMUST00000183569 57 ntBASIC18.11■□□□□ 0.49
Satb1Q60611 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Satb1Q60611 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Satb1Q60611 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Satb1Q60611 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Satb1Q60611 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Satb1Q60611 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Satb1Q60611 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.11■□□□□ 0.49
Satb1Q60611 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Satb1Q60611 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Satb1Q60611 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Satb1Q60611 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.1■□□□□ 0.49
Satb1Q60611 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Satb1Q60611 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Satb1Q60611 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Satb1Q60611 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Satb1Q60611 BC021767-201ENSMUST00000126387 1716 ntBASIC18.1■□□□□ 0.49
Satb1Q60611 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Satb1Q60611 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Satb1Q60611 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Satb1Q60611 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Satb1Q60611 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.1■□□□□ 0.49
Satb1Q60611 Gm17807-201ENSMUST00000186869 298 ntBASIC18.1■□□□□ 0.49
Satb1Q60611 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Satb1Q60611 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.1■□□□□ 0.49
Satb1Q60611 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.1■□□□□ 0.49
Satb1Q60611 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Satb1Q60611 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Satb1Q60611 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Satb1Q60611 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Satb1Q60611 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Satb1Q60611 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Satb1Q60611 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Satb1Q60611 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Satb1Q60611 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Satb1Q60611 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.09■□□□□ 0.49
Satb1Q60611 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Satb1Q60611 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.09■□□□□ 0.49
Satb1Q60611 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Satb1Q60611 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Satb1Q60611 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Satb1Q60611 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Satb1Q60611 Zfp783-201ENSMUST00000095946 670 ntBASIC18.09■□□□□ 0.49
Satb1Q60611 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Satb1Q60611 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Satb1Q60611 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Satb1Q60611 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Satb1Q60611 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Satb1Q60611 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Satb1Q60611 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Satb1Q60611 Golph3-205ENSMUST00000228671 2842 ntBASIC18.08■□□□□ 0.48
Satb1Q60611 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.08■□□□□ 0.48
Satb1Q60611 Gm6443-201ENSMUST00000203599 874 ntBASIC18.08■□□□□ 0.48
Satb1Q60611 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Satb1Q60611 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Satb1Q60611 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Satb1Q60611 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Satb1Q60611 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Satb1Q60611 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.08■□□□□ 0.48
Satb1Q60611 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Satb1Q60611 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Satb1Q60611 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Satb1Q60611 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Satb1Q60611 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Satb1Q60611 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.07■□□□□ 0.48
Satb1Q60611 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Satb1Q60611 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Satb1Q60611 Gm2274-201ENSMUST00000184539 609 ntBASIC18.07■□□□□ 0.48
Satb1Q60611 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Satb1Q60611 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Satb1Q60611 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Satb1Q60611 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Satb1Q60611 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Satb1Q60611 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Satb1Q60611 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Satb1Q60611 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Satb1Q60611 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms