Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-3Q5R1C3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-3Q5R1C3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-3Q5R1C3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-3Q5R1C3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-3Q5R1C3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav3-3Q5R1C3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-3Q5R1C3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav3-3Q5R1C3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-3Q5R1C3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-3Q5R1C3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trav3-3Q5R1C3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-3Q5R1C3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav3-3Q5R1C3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Golgb1-201ENSMUST00000023534 498 ntBASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav3-3Q5R1C3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav3-3Q5R1C3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav3-3Q5R1C3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav3-3Q5R1C3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav3-3Q5R1C3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms