Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clhc1Q5M6W3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clhc1Q5M6W3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clhc1Q5M6W3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clhc1Q5M6W3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clhc1Q5M6W3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clhc1Q5M6W3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clhc1Q5M6W3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clhc1Q5M6W3 AV356131-201ENSMUST00000206201 750 ntBASIC16.93■□□□□ 0.3
Clhc1Q5M6W3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clhc1Q5M6W3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clhc1Q5M6W3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clhc1Q5M6W3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clhc1Q5M6W3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.93■□□□□ 0.3
Clhc1Q5M6W3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clhc1Q5M6W3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Gm13534-201ENSMUST00000121169 513 ntBASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Clhc1Q5M6W3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Gm42569-201ENSMUST00000200539 472 ntBASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Gm7514-201ENSMUST00000209475 934 ntBASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clhc1Q5M6W3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clhc1Q5M6W3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.9■□□□□ 0.3
Clhc1Q5M6W3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clhc1Q5M6W3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clhc1Q5M6W3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clhc1Q5M6W3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.9■□□□□ 0.3
Clhc1Q5M6W3 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.9■□□□□ 0.3
Clhc1Q5M6W3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clhc1Q5M6W3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clhc1Q5M6W3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Clhc1Q5M6W3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clhc1Q5M6W3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clhc1Q5M6W3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clhc1Q5M6W3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Clhc1Q5M6W3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Clhc1Q5M6W3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Clhc1Q5M6W3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms