Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cnga4Q3UW12 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Cnga4Q3UW12 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cnga4Q3UW12 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cnga4Q3UW12 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cnga4Q3UW12 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cnga4Q3UW12 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.83■□□□□ 0.45
Cnga4Q3UW12 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cnga4Q3UW12 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cnga4Q3UW12 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cnga4Q3UW12 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cnga4Q3UW12 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cnga4Q3UW12 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cnga4Q3UW12 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cnga4Q3UW12 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cnga4Q3UW12 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cnga4Q3UW12 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.82■□□□□ 0.44
Cnga4Q3UW12 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cnga4Q3UW12 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cnga4Q3UW12 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cnga4Q3UW12 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cnga4Q3UW12 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cnga4Q3UW12 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Gm12821-201ENSMUST00000120022 600 ntBASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Gm43060-201ENSMUST00000200621 289 ntBASIC17.81■□□□□ 0.44
Cnga4Q3UW12 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Reep4-203ENSMUST00000226563 1444 ntBASIC17.81■□□□□ 0.44
Cnga4Q3UW12 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Gm9988-201ENSMUST00000069786 435 ntBASIC17.8■□□□□ 0.44
Cnga4Q3UW12 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms