Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hddc2Q3SXD3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Gm12922-201ENSMUST00000120626 809 ntBASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Rps24-207ENSMUST00000224568 714 ntBASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Golgb1-201ENSMUST00000023534 498 ntBASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.31■□□□□ 0.2
Hddc2Q3SXD3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Gm45102-201ENSMUST00000207427 857 ntBASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hddc2Q3SXD3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hddc2Q3SXD3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hddc2Q3SXD3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hddc2Q3SXD3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hddc2Q3SXD3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hddc2Q3SXD3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.29■□□□□ 0.2
Hddc2Q3SXD3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hddc2Q3SXD3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Hddc2Q3SXD3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Hddc2Q3SXD3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.29■□□□□ 0.2
Hddc2Q3SXD3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hddc2Q3SXD3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hddc2Q3SXD3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hddc2Q3SXD3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hddc2Q3SXD3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hddc2Q3SXD3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hddc2Q3SXD3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hddc2Q3SXD3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hddc2Q3SXD3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hddc2Q3SXD3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hddc2Q3SXD3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hddc2Q3SXD3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hddc2Q3SXD3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hddc2Q3SXD3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.28■□□□□ 0.2
Hddc2Q3SXD3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hddc2Q3SXD3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms