Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.34■□□□□ 0.21
Emx1Q04742 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Emx1Q04742 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Emx1Q04742 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.34■□□□□ 0.21
Emx1Q04742 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Emx1Q04742 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Emx1Q04742 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Emx1Q04742 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Emx1Q04742 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Emx1Q04742 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.33■□□□□ 0.21
Emx1Q04742 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Emx1Q04742 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Emx1Q04742 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Emx1Q04742 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Emx1Q04742 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.33■□□□□ 0.2
Emx1Q04742 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Emx1Q04742 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Emx1Q04742 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Emx1Q04742 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Emx1Q04742 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Emx1Q04742 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Emx1Q04742 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Emx1Q04742 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Emx1Q04742 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Emx1Q04742 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.32■□□□□ 0.2
Emx1Q04742 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Gm10653-202ENSMUST00000139570 835 ntBASIC16.32■□□□□ 0.2
Emx1Q04742 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Emx1Q04742 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.32■□□□□ 0.2
Emx1Q04742 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Emx1Q04742 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
Emx1Q04742 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.32■□□□□ 0.2
Emx1Q04742 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Emx1Q04742 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Emx1Q04742 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Emx1Q04742 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Emx1Q04742 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Emx1Q04742 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Emx1Q04742 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Emx1Q04742 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Emx1Q04742 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Emx1Q04742 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Emx1Q04742 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.31■□□□□ 0.2
Emx1Q04742 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.31■□□□□ 0.2
Emx1Q04742 Gm22240-201ENSMUST00000175225 82 ntBASIC16.31■□□□□ 0.2
Emx1Q04742 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.31■□□□□ 0.2
Emx1Q04742 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Emx1Q04742 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Emx1Q04742 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Emx1Q04742 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Emx1Q04742 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Emx1Q04742 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Emx1Q04742 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Emx1Q04742 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Emx1Q04742 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.3■□□□□ 0.2
Emx1Q04742 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Emx1Q04742 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.3■□□□□ 0.2
Emx1Q04742 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Emx1Q04742 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Emx1Q04742 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Emx1Q04742 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Emx1Q04742 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Emx1Q04742 Gm8520-201ENSMUST00000186517 868 ntBASIC16.3■□□□□ 0.2
Emx1Q04742 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Emx1Q04742 Gm5408-201ENSMUST00000197998 747 ntBASIC16.3■□□□□ 0.2
Emx1Q04742 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.3■□□□□ 0.2
Emx1Q04742 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Emx1Q04742 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Emx1Q04742 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Emx1Q04742 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Emx1Q04742 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Emx1Q04742 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Emx1Q04742 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Emx1Q04742 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Emx1Q04742 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.29■□□□□ 0.2
Emx1Q04742 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Emx1Q04742 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.29■□□□□ 0.2
Emx1Q04742 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.29■□□□□ 0.2
Emx1Q04742 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Emx1Q04742 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Emx1Q04742 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.29■□□□□ 0.2
Emx1Q04742 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms