Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lbx1P52955 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lbx1P52955 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lbx1P52955 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lbx1P52955 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lbx1P52955 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lbx1P52955 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lbx1P52955 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.93■□□□□ 0.3
Lbx1P52955 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lbx1P52955 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lbx1P52955 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lbx1P52955 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lbx1P52955 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lbx1P52955 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lbx1P52955 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.93■□□□□ 0.3
Lbx1P52955 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lbx1P52955 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
Lbx1P52955 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lbx1P52955 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lbx1P52955 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lbx1P52955 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lbx1P52955 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Lbx1P52955 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Lbx1P52955 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lbx1P52955 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lbx1P52955 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Lbx1P52955 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lbx1P52955 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lbx1P52955 Gm14494-201ENSMUST00000118786 435 ntBASIC16.92■□□□□ 0.3
Lbx1P52955 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.92■□□□□ 0.3
Lbx1P52955 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lbx1P52955 Gm5745-201ENSMUST00000183748 313 ntBASIC16.92■□□□□ 0.3
Lbx1P52955 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.92■□□□□ 0.3
Lbx1P52955 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.92■□□□□ 0.3
Lbx1P52955 Gm10060-201ENSMUST00000212002 111 ntBASIC16.92■□□□□ 0.3
Lbx1P52955 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.92■□□□□ 0.3
Lbx1P52955 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lbx1P52955 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lbx1P52955 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lbx1P52955 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lbx1P52955 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lbx1P52955 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lbx1P52955 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lbx1P52955 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lbx1P52955 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.91■□□□□ 0.3
Lbx1P52955 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lbx1P52955 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lbx1P52955 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lbx1P52955 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lbx1P52955 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.91■□□□□ 0.3
Lbx1P52955 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lbx1P52955 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lbx1P52955 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.91■□□□□ 0.3
Lbx1P52955 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lbx1P52955 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lbx1P52955 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lbx1P52955 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lbx1P52955 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.91■□□□□ 0.3
Lbx1P52955 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lbx1P52955 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lbx1P52955 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lbx1P52955 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lbx1P52955 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.9■□□□□ 0.3
Lbx1P52955 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lbx1P52955 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lbx1P52955 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lbx1P52955 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lbx1P52955 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lbx1P52955 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.9■□□□□ 0.3
Lbx1P52955 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.9■□□□□ 0.3
Lbx1P52955 Psmb5-202ENSMUST00000227257 622 ntBASIC16.9■□□□□ 0.3
Lbx1P52955 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lbx1P52955 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lbx1P52955 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lbx1P52955 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lbx1P52955 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lbx1P52955 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lbx1P52955 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lbx1P52955 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lbx1P52955 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lbx1P52955 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.89■□□□□ 0.29
Lbx1P52955 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lbx1P52955 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lbx1P52955 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lbx1P52955 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.89■□□□□ 0.29
Lbx1P52955 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lbx1P52955 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lbx1P52955 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.89■□□□□ 0.29
Lbx1P52955 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.89■□□□□ 0.29
Lbx1P52955 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Lbx1P52955 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lbx1P52955 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lbx1P52955 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lbx1P52955 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lbx1P52955 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lbx1P52955 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lbx1P52955 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Lbx1P52955 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lbx1P52955 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lbx1P52955 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms