Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.56□□□□□ -0.08
Nkx2-1P50220 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.56□□□□□ -0.08
Nkx2-1P50220 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Idnk-204ENSMUST00000226010 1898 ntBASIC14.56□□□□□ -0.08
Nkx2-1P50220 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-1P50220 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.55□□□□□ -0.08
Nkx2-1P50220 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-1P50220 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.54□□□□□ -0.08
Nkx2-1P50220 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-1P50220 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nkx2-1P50220 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms