Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GdnfP48540 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
GdnfP48540 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
GdnfP48540 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GdnfP48540 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GdnfP48540 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GdnfP48540 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GdnfP48540 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GdnfP48540 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GdnfP48540 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.36■□□□□ 0.05
GdnfP48540 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GdnfP48540 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
GdnfP48540 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GdnfP48540 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
GdnfP48540 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GdnfP48540 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GdnfP48540 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
GdnfP48540 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GdnfP48540 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GdnfP48540 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GdnfP48540 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.35■□□□□ 0.05
GdnfP48540 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
GdnfP48540 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.35■□□□□ 0.05
GdnfP48540 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GdnfP48540 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GdnfP48540 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
GdnfP48540 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GdnfP48540 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GdnfP48540 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GdnfP48540 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GdnfP48540 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.34■□□□□ 0.05
GdnfP48540 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GdnfP48540 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
GdnfP48540 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GdnfP48540 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GdnfP48540 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GdnfP48540 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GdnfP48540 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GdnfP48540 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GdnfP48540 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.33■□□□□ 0.05
GdnfP48540 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GdnfP48540 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GdnfP48540 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GdnfP48540 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
GdnfP48540 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
GdnfP48540 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
GdnfP48540 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.33■□□□□ 0.04
GdnfP48540 Gm37179-201ENSMUST00000194862 823 ntBASIC15.33■□□□□ 0.04
GdnfP48540 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GdnfP48540 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GdnfP48540 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
GdnfP48540 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GdnfP48540 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GdnfP48540 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GdnfP48540 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.33■□□□□ 0.04
GdnfP48540 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GdnfP48540 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GdnfP48540 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GdnfP48540 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GdnfP48540 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GdnfP48540 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GdnfP48540 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GdnfP48540 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.32■□□□□ 0.04
GdnfP48540 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GdnfP48540 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GdnfP48540 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GdnfP48540 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.32■□□□□ 0.04
GdnfP48540 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GdnfP48540 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.32■□□□□ 0.04
GdnfP48540 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.32■□□□□ 0.04
GdnfP48540 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.32■□□□□ 0.04
GdnfP48540 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GdnfP48540 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GdnfP48540 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GdnfP48540 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.32■□□□□ 0.04
GdnfP48540 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GdnfP48540 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GdnfP48540 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GdnfP48540 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GdnfP48540 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
GdnfP48540 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GdnfP48540 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GdnfP48540 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GdnfP48540 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GdnfP48540 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GdnfP48540 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GdnfP48540 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GdnfP48540 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.31■□□□□ 0.04
GdnfP48540 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
GdnfP48540 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.31■□□□□ 0.04
GdnfP48540 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.31■□□□□ 0.04
GdnfP48540 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.31■□□□□ 0.04
GdnfP48540 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.31■□□□□ 0.04
GdnfP48540 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GdnfP48540 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
GdnfP48540 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GdnfP48540 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GdnfP48540 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GdnfP48540 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GdnfP48540 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms