Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc2P43407 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.7■□□□□ 0.74
Sdc2P43407 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdc2P43407 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdc2P43407 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sdc2P43407 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sdc2P43407 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sdc2P43407 Gm29791-202ENSMUST00000207888 369 ntBASIC19.69■□□□□ 0.74
Sdc2P43407 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.69■□□□□ 0.74
Sdc2P43407 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sdc2P43407 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdc2P43407 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.69■□□□□ 0.74
Sdc2P43407 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc2P43407 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sdc2P43407 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Sdc2P43407 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc2P43407 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc2P43407 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc2P43407 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc2P43407 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc2P43407 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc2P43407 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc2P43407 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.68■□□□□ 0.74
Sdc2P43407 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.68■□□□□ 0.74
Sdc2P43407 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc2P43407 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc2P43407 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc2P43407 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc2P43407 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdc2P43407 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.68■□□□□ 0.74
Sdc2P43407 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.67■□□□□ 0.74
Sdc2P43407 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.67■□□□□ 0.74
Sdc2P43407 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc2P43407 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc2P43407 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.67■□□□□ 0.74
Sdc2P43407 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.67■□□□□ 0.74
Sdc2P43407 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc2P43407 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Sdc2P43407 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc2P43407 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc2P43407 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Sdc2P43407 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sdc2P43407 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.67■□□□□ 0.74
Sdc2P43407 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc2P43407 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc2P43407 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sdc2P43407 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sdc2P43407 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc2P43407 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc2P43407 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc2P43407 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc2P43407 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc2P43407 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc2P43407 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.66■□□□□ 0.74
Sdc2P43407 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.66■□□□□ 0.74
Sdc2P43407 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc2P43407 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.66■□□□□ 0.74
Sdc2P43407 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc2P43407 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc2P43407 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc2P43407 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.66■□□□□ 0.74
Sdc2P43407 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc2P43407 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sdc2P43407 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.66■□□□□ 0.74
Sdc2P43407 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Sdc2P43407 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Sdc2P43407 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdc2P43407 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Sdc2P43407 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sdc2P43407 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sdc2P43407 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sdc2P43407 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.64■□□□□ 0.73
Sdc2P43407 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sdc2P43407 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sdc2P43407 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sdc2P43407 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.63■□□□□ 0.73
Sdc2P43407 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc2P43407 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc2P43407 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc2P43407 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sdc2P43407 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc2P43407 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sdc2P43407 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sdc2P43407 Gm11927-201ENSMUST00000118472 759 ntBASIC19.63■□□□□ 0.73
Sdc2P43407 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms