Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn1aP39689 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Gm38027-201ENSMUST00000192315 235 ntBASIC14.48□□□□□ -0.09
Cdkn1aP39689 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.48□□□□□ -0.09
Cdkn1aP39689 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Cdkn1aP39689 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdkn1aP39689 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Gm13559-201ENSMUST00000120476 863 ntBASIC14.47□□□□□ -0.09
Cdkn1aP39689 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkn1aP39689 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn1aP39689 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cdkn1aP39689 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn1aP39689 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn1aP39689 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkn1aP39689 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkn1aP39689 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkn1aP39689 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkn1aP39689 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkn1aP39689 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.45□□□□□ -0.1
Cdkn1aP39689 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn1aP39689 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Gm27463-201ENSMUST00000183569 57 ntBASIC14.45□□□□□ -0.1
Cdkn1aP39689 Gm7889-201ENSMUST00000185591 958 ntBASIC14.45□□□□□ -0.1
Cdkn1aP39689 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdkn1aP39689 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.45□□□□□ -0.1
Cdkn1aP39689 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.45□□□□□ -0.1
Cdkn1aP39689 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn1aP39689 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn1aP39689 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms