Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RetP35546 Gm10175-202ENSMUST00000208752 441 ntBASIC16.41■□□□□ 0.22
RetP35546 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RetP35546 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.41■□□□□ 0.22
RetP35546 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RetP35546 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RetP35546 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RetP35546 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RetP35546 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RetP35546 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RetP35546 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RetP35546 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RetP35546 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RetP35546 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RetP35546 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RetP35546 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.4■□□□□ 0.22
RetP35546 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RetP35546 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RetP35546 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RetP35546 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RetP35546 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RetP35546 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RetP35546 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RetP35546 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RetP35546 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RetP35546 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RetP35546 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RetP35546 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RetP35546 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RetP35546 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RetP35546 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RetP35546 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.39■□□□□ 0.21
RetP35546 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.39■□□□□ 0.21
RetP35546 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RetP35546 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RetP35546 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RetP35546 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RetP35546 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.39■□□□□ 0.21
RetP35546 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RetP35546 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
RetP35546 Flg-201ENSMUST00000050758 1488 ntBASIC16.39■□□□□ 0.21
RetP35546 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
RetP35546 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.39■□□□□ 0.21
RetP35546 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RetP35546 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.39■□□□□ 0.21
RetP35546 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RetP35546 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RetP35546 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RetP35546 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RetP35546 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RetP35546 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.38■□□□□ 0.21
RetP35546 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RetP35546 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RetP35546 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.38■□□□□ 0.21
RetP35546 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RetP35546 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RetP35546 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RetP35546 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.38■□□□□ 0.21
RetP35546 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RetP35546 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RetP35546 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RetP35546 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RetP35546 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RetP35546 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RetP35546 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RetP35546 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RetP35546 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RetP35546 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RetP35546 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RetP35546 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RetP35546 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RetP35546 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RetP35546 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RetP35546 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RetP35546 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RetP35546 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RetP35546 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RetP35546 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RetP35546 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RetP35546 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RetP35546 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RetP35546 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
RetP35546 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
RetP35546 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RetP35546 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.36■□□□□ 0.21
RetP35546 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RetP35546 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RetP35546 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.36■□□□□ 0.21
RetP35546 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RetP35546 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RetP35546 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RetP35546 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.36■□□□□ 0.21
RetP35546 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RetP35546 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.36■□□□□ 0.21
RetP35546 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RetP35546 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RetP35546 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RetP35546 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RetP35546 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RetP35546 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms