Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thbs1P35441 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.21■□□□□ 0.19
Thbs1P35441 Gm13401-201ENSMUST00000117074 291 ntBASIC16.21■□□□□ 0.19
Thbs1P35441 Gm15375-201ENSMUST00000119510 849 ntBASIC16.21■□□□□ 0.19
Thbs1P35441 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thbs1P35441 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Thbs1P35441 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thbs1P35441 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thbs1P35441 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Thbs1P35441 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thbs1P35441 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Thbs1P35441 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Thbs1P35441 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.21■□□□□ 0.18
Thbs1P35441 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Thbs1P35441 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Thbs1P35441 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Thbs1P35441 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thbs1P35441 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thbs1P35441 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.2■□□□□ 0.18
Thbs1P35441 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.2■□□□□ 0.18
Thbs1P35441 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.2■□□□□ 0.18
Thbs1P35441 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Thbs1P35441 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thbs1P35441 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thbs1P35441 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.2■□□□□ 0.18
Thbs1P35441 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thbs1P35441 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thbs1P35441 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thbs1P35441 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thbs1P35441 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Thbs1P35441 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thbs1P35441 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thbs1P35441 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Thbs1P35441 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Thbs1P35441 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Thbs1P35441 Gm11249-201ENSMUST00000117071 859 ntBASIC16.19■□□□□ 0.18
Thbs1P35441 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.19■□□□□ 0.18
Thbs1P35441 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Thbs1P35441 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thbs1P35441 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Thbs1P35441 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thbs1P35441 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thbs1P35441 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Thbs1P35441 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.18■□□□□ 0.18
Thbs1P35441 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Thbs1P35441 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.18■□□□□ 0.18
Thbs1P35441 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Thbs1P35441 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Thbs1P35441 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Thbs1P35441 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thbs1P35441 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.17■□□□□ 0.18
Thbs1P35441 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Thbs1P35441 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.17■□□□□ 0.18
Thbs1P35441 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Thbs1P35441 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.17■□□□□ 0.18
Thbs1P35441 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC16.17■□□□□ 0.18
Thbs1P35441 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.17■□□□□ 0.18
Thbs1P35441 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thbs1P35441 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.17■□□□□ 0.18
Thbs1P35441 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Thbs1P35441 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.16■□□□□ 0.18
Thbs1P35441 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms