Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.84□□□□□ -0.35
TcraP01849 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TcraP01849 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.84□□□□□ -0.35
TcraP01849 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TcraP01849 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
TcraP01849 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TcraP01849 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TcraP01849 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TcraP01849 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TcraP01849 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TcraP01849 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TcraP01849 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TcraP01849 Gm12821-201ENSMUST00000120022 600 ntBASIC12.83□□□□□ -0.36
TcraP01849 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TcraP01849 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.83□□□□□ -0.36
TcraP01849 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TcraP01849 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
TcraP01849 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TcraP01849 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TcraP01849 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TcraP01849 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TcraP01849 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.83□□□□□ -0.36
TcraP01849 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
TcraP01849 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TcraP01849 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TcraP01849 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TcraP01849 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.83□□□□□ -0.36
TcraP01849 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TcraP01849 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
TcraP01849 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.82□□□□□ -0.36
TcraP01849 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.82□□□□□ -0.36
TcraP01849 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
TcraP01849 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TcraP01849 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TcraP01849 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
TcraP01849 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.82□□□□□ -0.36
TcraP01849 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
TcraP01849 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.82□□□□□ -0.36
TcraP01849 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.82□□□□□ -0.36
TcraP01849 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TcraP01849 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TcraP01849 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC12.81□□□□□ -0.36
TcraP01849 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.81□□□□□ -0.36
TcraP01849 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.81□□□□□ -0.36
TcraP01849 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TcraP01849 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.81□□□□□ -0.36
TcraP01849 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
TcraP01849 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TcraP01849 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TcraP01849 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Mir7075-201ENSMUST00000184187 82 ntBASIC12.81□□□□□ -0.36
TcraP01849 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.81□□□□□ -0.36
TcraP01849 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.81□□□□□ -0.36
TcraP01849 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TcraP01849 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TcraP01849 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TcraP01849 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TcraP01849 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TcraP01849 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms