Protein–RNA interactions for Protein: O70584

Nkx2-8, Homeobox protein Nkx-2.8, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-8O70584 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-8O70584 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-8O70584 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-8O70584 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-8O70584 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-8O70584 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-8O70584 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-8O70584 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-8O70584 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-8O70584 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-8O70584 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-8O70584 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkx2-8O70584 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-8O70584 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-8O70584 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-8O70584 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-8O70584 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.25□□□□□ -0.13
Nkx2-8O70584 Gm10653-202ENSMUST00000139570 835 ntBASIC14.25□□□□□ -0.13
Nkx2-8O70584 Gm44549-201ENSMUST00000208351 577 ntBASIC14.25□□□□□ -0.13
Nkx2-8O70584 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-8O70584 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-8O70584 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Nkx2-8O70584 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-8O70584 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-8O70584 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-8O70584 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx2-8O70584 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx2-8O70584 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-8O70584 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-8O70584 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-8O70584 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-8O70584 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx2-8O70584 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-8O70584 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-8O70584 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Nkx2-8O70584 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nkx2-8O70584 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-8O70584 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nkx2-8O70584 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-8O70584 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-8O70584 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-8O70584 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.23□□□□□ -0.13
Nkx2-8O70584 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nkx2-8O70584 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-8O70584 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Gm12896-201ENSMUST00000118430 226 ntBASIC14.22□□□□□ -0.13
Nkx2-8O70584 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Gm20760-201ENSMUST00000179197 648 ntBASIC14.22□□□□□ -0.13
Nkx2-8O70584 Gm2559-201ENSMUST00000201323 363 ntBASIC14.22□□□□□ -0.13
Nkx2-8O70584 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-8O70584 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-8O70584 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Nkx2-8O70584 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-8O70584 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-8O70584 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-8O70584 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-8O70584 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-8O70584 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-8O70584 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-8O70584 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-8O70584 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-8O70584 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-8O70584 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.21□□□□□ -0.13
Nkx2-8O70584 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms