Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaO55042 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SncaO55042 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaO55042 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SncaO55042 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.53□□□□□ -0.08
SncaO55042 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaO55042 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SncaO55042 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaO55042 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.53□□□□□ -0.08
SncaO55042 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SncaO55042 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaO55042 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SncaO55042 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaO55042 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaO55042 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaO55042 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SncaO55042 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SncaO55042 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SncaO55042 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SncaO55042 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SncaO55042 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SncaO55042 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SncaO55042 Gm42642-201ENSMUST00000200683 355 ntBASIC14.52□□□□□ -0.09
SncaO55042 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SncaO55042 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SncaO55042 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SncaO55042 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SncaO55042 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SncaO55042 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SncaO55042 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SncaO55042 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SncaO55042 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SncaO55042 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SncaO55042 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.51□□□□□ -0.09
SncaO55042 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SncaO55042 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.51□□□□□ -0.09
SncaO55042 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SncaO55042 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaO55042 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaO55042 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SncaO55042 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SncaO55042 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.51□□□□□ -0.09
SncaO55042 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.51□□□□□ -0.09
SncaO55042 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.51□□□□□ -0.09
SncaO55042 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaO55042 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaO55042 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaO55042 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaO55042 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaO55042 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SncaO55042 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaO55042 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
SncaO55042 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SncaO55042 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SncaO55042 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SncaO55042 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
SncaO55042 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SncaO55042 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.5□□□□□ -0.09
SncaO55042 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.5□□□□□ -0.09
SncaO55042 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.5□□□□□ -0.09
SncaO55042 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SncaO55042 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.5□□□□□ -0.09
SncaO55042 Gm10033-202ENSMUST00000211874 928 ntBASIC14.5□□□□□ -0.09
SncaO55042 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.5□□□□□ -0.09
SncaO55042 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.5□□□□□ -0.09
SncaO55042 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SncaO55042 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SncaO55042 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SncaO55042 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.49□□□□□ -0.09
SncaO55042 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SncaO55042 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SncaO55042 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SncaO55042 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SncaO55042 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.49□□□□□ -0.09
SncaO55042 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.49□□□□□ -0.09
SncaO55042 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SncaO55042 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SncaO55042 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms