Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf6F6VAN0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atf6F6VAN0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Atf6F6VAN0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atf6F6VAN0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf6F6VAN0 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.01■□□□□ 0.47
Atf6F6VAN0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf6F6VAN0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf6F6VAN0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18■□□□□ 0.47
Atf6F6VAN0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atf6F6VAN0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Atf6F6VAN0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atf6F6VAN0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atf6F6VAN0 Gm13401-201ENSMUST00000117074 291 ntBASIC18■□□□□ 0.47
Atf6F6VAN0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
Atf6F6VAN0 Mir6349-201ENSMUST00000184059 97 ntBASIC18■□□□□ 0.47
Atf6F6VAN0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atf6F6VAN0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18■□□□□ 0.47
Atf6F6VAN0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atf6F6VAN0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atf6F6VAN0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Atf6F6VAN0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18■□□□□ 0.47
Atf6F6VAN0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Atf6F6VAN0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Gm13158-201ENSMUST00000122007 736 ntBASIC17.99■□□□□ 0.47
Atf6F6VAN0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Atf6F6VAN0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf6F6VAN0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Gm12527-201ENSMUST00000117967 564 ntBASIC17.98■□□□□ 0.47
Atf6F6VAN0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Atf6F6VAN0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Atf6F6VAN0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Atf6F6VAN0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf6F6VAN0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf6F6VAN0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atf6F6VAN0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf6F6VAN0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.97■□□□□ 0.47
Atf6F6VAN0 Gm37856-201ENSMUST00000191634 999 ntBASIC17.97■□□□□ 0.47
Atf6F6VAN0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atf6F6VAN0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf6F6VAN0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf6F6VAN0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf6F6VAN0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Atf6F6VAN0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atf6F6VAN0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atf6F6VAN0 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.97■□□□□ 0.47
Atf6F6VAN0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atf6F6VAN0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Atf6F6VAN0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Atf6F6VAN0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf6F6VAN0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atf6F6VAN0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf6F6VAN0 Trmt13-210ENSMUST00000198454 880 ntBASIC17.96■□□□□ 0.47
Atf6F6VAN0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.96■□□□□ 0.47
Atf6F6VAN0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.96■□□□□ 0.47
Atf6F6VAN0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf6F6VAN0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Atf6F6VAN0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf6F6VAN0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf6F6VAN0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.96■□□□□ 0.47
Atf6F6VAN0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atf6F6VAN0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf6F6VAN0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf6F6VAN0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Atf6F6VAN0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Atf6F6VAN0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Atf6F6VAN0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf6F6VAN0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms