Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Vti1a-206ENSMUST00000225529 1244 ntBASIC24.24■■□□□ 1.47
Zc3h13E9Q784 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Zc3h13E9Q784 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Zc3h13E9Q784 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC24.24■■□□□ 1.47
Zc3h13E9Q784 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Zc3h13E9Q784 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Zc3h13E9Q784 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Zc3h13E9Q784 Gm11452-201ENSMUST00000122376 690 ntBASIC24.24■■□□□ 1.47
Zc3h13E9Q784 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Zc3h13E9Q784 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC24.24■■□□□ 1.47
Zc3h13E9Q784 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Gm12895-201ENSMUST00000122214 226 ntBASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Zc3h13E9Q784 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Zc3h13E9Q784 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Zc3h13E9Q784 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Zc3h13E9Q784 Gm43545-201ENSMUST00000196765 2779 ntBASIC24.22■■□□□ 1.47
Zc3h13E9Q784 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Zc3h13E9Q784 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Zc3h13E9Q784 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC24.21■■□□□ 1.47
Zc3h13E9Q784 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Zc3h13E9Q784 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Zc3h13E9Q784 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC24.21■■□□□ 1.47
Zc3h13E9Q784 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Zc3h13E9Q784 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Zc3h13E9Q784 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Zc3h13E9Q784 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Zc3h13E9Q784 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Zc3h13E9Q784 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Zc3h13E9Q784 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Zc3h13E9Q784 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC24.2■■□□□ 1.46
Zc3h13E9Q784 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Zc3h13E9Q784 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Zc3h13E9Q784 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
Zc3h13E9Q784 Gm11594-201ENSMUST00000122313 162 ntBASIC24.2■■□□□ 1.46
Zc3h13E9Q784 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC24.2■■□□□ 1.46
Zc3h13E9Q784 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Zc3h13E9Q784 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Zc3h13E9Q784 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Zc3h13E9Q784 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Zc3h13E9Q784 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
Zc3h13E9Q784 AC161829.1-201ENSMUST00000220298 281 ntBASIC24.19■■□□□ 1.46
Zc3h13E9Q784 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Zc3h13E9Q784 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Zc3h13E9Q784 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Zc3h13E9Q784 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
Zc3h13E9Q784 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Zc3h13E9Q784 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
Zc3h13E9Q784 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Zc3h13E9Q784 AC138767.1-201ENSMUST00000222661 415 ntBASIC24.18■■□□□ 1.46
Zc3h13E9Q784 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC24.18■■□□□ 1.46
Zc3h13E9Q784 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Zc3h13E9Q784 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Zc3h13E9Q784 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Zc3h13E9Q784 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC24.18■■□□□ 1.46
Zc3h13E9Q784 Gm19721-201ENSMUST00000195284 1764 ntBASIC24.18■■□□□ 1.46
Zc3h13E9Q784 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
Zc3h13E9Q784 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC24.18■■□□□ 1.46
Zc3h13E9Q784 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC24.18■■□□□ 1.46
Zc3h13E9Q784 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC24.18■■□□□ 1.46
Zc3h13E9Q784 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Zc3h13E9Q784 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Zc3h13E9Q784 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Zc3h13E9Q784 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Zc3h13E9Q784 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Zc3h13E9Q784 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Zc3h13E9Q784 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Zc3h13E9Q784 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Zc3h13E9Q784 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Zc3h13E9Q784 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Zc3h13E9Q784 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC24.17■■□□□ 1.46
Zc3h13E9Q784 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Zc3h13E9Q784 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC24.17■■□□□ 1.46
Zc3h13E9Q784 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC24.17■■□□□ 1.46
Zc3h13E9Q784 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Zc3h13E9Q784 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Zc3h13E9Q784 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC24.17■■□□□ 1.46
Zc3h13E9Q784 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Zc3h13E9Q784 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Zc3h13E9Q784 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC24.16■■□□□ 1.46
Zc3h13E9Q784 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Zc3h13E9Q784 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC24.16■■□□□ 1.46
Zc3h13E9Q784 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Zc3h13E9Q784 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Zc3h13E9Q784 Gm10052-201ENSMUST00000168019 960 ntBASIC24.16■■□□□ 1.46
Zc3h13E9Q784 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Zc3h13E9Q784 Gm7729-201ENSMUST00000050143 801 ntBASIC24.16■■□□□ 1.46
Zc3h13E9Q784 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms