Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.29□□□□□ -0.12
Chd6A3KFM7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chd6A3KFM7 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.28□□□□□ -0.12
Chd6A3KFM7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd6A3KFM7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.28□□□□□ -0.12
Chd6A3KFM7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chd6A3KFM7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd6A3KFM7 Gm9727-201ENSMUST00000161387 555 ntBASIC14.28□□□□□ -0.12
Chd6A3KFM7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd6A3KFM7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chd6A3KFM7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Chd6A3KFM7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Chd6A3KFM7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd6A3KFM7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chd6A3KFM7 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.28□□□□□ -0.12
Chd6A3KFM7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chd6A3KFM7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.28□□□□□ -0.12
Chd6A3KFM7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chd6A3KFM7 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.28□□□□□ -0.12
Chd6A3KFM7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd6A3KFM7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd6A3KFM7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd6A3KFM7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd6A3KFM7 Gm12644-201ENSMUST00000119935 606 ntBASIC14.27□□□□□ -0.12
Chd6A3KFM7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd6A3KFM7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Chd6A3KFM7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd6A3KFM7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.27□□□□□ -0.13
Chd6A3KFM7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.27□□□□□ -0.13
Chd6A3KFM7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.27□□□□□ -0.13
Chd6A3KFM7 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.27□□□□□ -0.13
Chd6A3KFM7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chd6A3KFM7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Gm11424-201ENSMUST00000121929 829 ntBASIC14.26□□□□□ -0.13
Chd6A3KFM7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd6A3KFM7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chd6A3KFM7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Gm14701-201ENSMUST00000117156 348 ntBASIC14.25□□□□□ -0.13
Chd6A3KFM7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.25□□□□□ -0.13
Chd6A3KFM7 AA543401-201ENSMUST00000164248 1269 ntBASIC14.25□□□□□ -0.13
Chd6A3KFM7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.25□□□□□ -0.13
Chd6A3KFM7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chd6A3KFM7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd6A3KFM7 Gm15372-201ENSMUST00000120729 834 ntBASIC14.24□□□□□ -0.13
Chd6A3KFM7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.24□□□□□ -0.13
Chd6A3KFM7 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd6A3KFM7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Chd6A3KFM7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd6A3KFM7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd6A3KFM7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd6A3KFM7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Chd6A3KFM7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd6A3KFM7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd6A3KFM7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd6A3KFM7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.24□□□□□ -0.13
Chd6A3KFM7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Chd6A3KFM7 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.24□□□□□ -0.13
Chd6A3KFM7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd6A3KFM7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd6A3KFM7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chd6A3KFM7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms