Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
IsxA1A546 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
IsxA1A546 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.31■□□□□ 0.2
IsxA1A546 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IsxA1A546 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.31■□□□□ 0.2
IsxA1A546 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IsxA1A546 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IsxA1A546 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.31■□□□□ 0.2
IsxA1A546 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.31■□□□□ 0.2
IsxA1A546 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IsxA1A546 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IsxA1A546 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IsxA1A546 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
IsxA1A546 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.31■□□□□ 0.2
IsxA1A546 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IsxA1A546 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IsxA1A546 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
IsxA1A546 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.31■□□□□ 0.2
IsxA1A546 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
IsxA1A546 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IsxA1A546 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IsxA1A546 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IsxA1A546 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
IsxA1A546 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IsxA1A546 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
IsxA1A546 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.3■□□□□ 0.2
IsxA1A546 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.3■□□□□ 0.2
IsxA1A546 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IsxA1A546 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
IsxA1A546 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IsxA1A546 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IsxA1A546 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IsxA1A546 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IsxA1A546 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
IsxA1A546 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IsxA1A546 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IsxA1A546 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IsxA1A546 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IsxA1A546 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IsxA1A546 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IsxA1A546 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
IsxA1A546 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IsxA1A546 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IsxA1A546 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.29■□□□□ 0.2
IsxA1A546 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IsxA1A546 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IsxA1A546 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IsxA1A546 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IsxA1A546 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
IsxA1A546 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IsxA1A546 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
IsxA1A546 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IsxA1A546 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IsxA1A546 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IsxA1A546 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
IsxA1A546 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.28■□□□□ 0.2
IsxA1A546 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.28■□□□□ 0.2
IsxA1A546 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
IsxA1A546 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
IsxA1A546 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
IsxA1A546 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
IsxA1A546 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
IsxA1A546 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.28■□□□□ 0.2
IsxA1A546 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.28■□□□□ 0.2
IsxA1A546 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.28■□□□□ 0.2
IsxA1A546 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
IsxA1A546 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IsxA1A546 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IsxA1A546 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IsxA1A546 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IsxA1A546 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
IsxA1A546 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.27■□□□□ 0.2
IsxA1A546 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
IsxA1A546 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IsxA1A546 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IsxA1A546 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
IsxA1A546 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
IsxA1A546 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IsxA1A546 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IsxA1A546 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.27■□□□□ 0.2
IsxA1A546 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IsxA1A546 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.27■□□□□ 0.19
IsxA1A546 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
IsxA1A546 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IsxA1A546 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
IsxA1A546 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms