Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11927-201ENSMUST00000118472 759 ntBASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Mir5133-201ENSMUST00000174955 77 ntBASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27405-201ENSMUST00000184201 112 ntBASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms