Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Mtag2-201ENSMUST00000058665 714 ntBASIC12.71□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-1A0A0G2JEU8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.71□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-1A0A0G2JEU8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Mir7071-201ENSMUST00000184847 69 ntBASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm10138-203ENSMUST00000206952 366 ntBASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm38285-201ENSMUST00000192928 922 ntBASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms