Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gm8493-201ENSMUST00000196881 489 ntBASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3n-3A0A0G2JEM0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gm12821-201ENSMUST00000120022 600 ntBASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3n-3A0A0G2JEM0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms