Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Gm6139-201ENSMUST00000079261 882 ntBASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.19□□□□□ -0.14
Trav6d-5A0A075B6B9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-5A0A075B6B9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-5A0A075B6B9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-5A0A075B6B9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-5A0A075B6B9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-5A0A075B6B9 Gm29791-202ENSMUST00000207888 369 ntBASIC14.18□□□□□ -0.14
Trav6d-5A0A075B6B9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav6d-5A0A075B6B9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav6d-5A0A075B6B9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-5A0A075B6B9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav6d-5A0A075B6B9 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.18□□□□□ -0.14
Trav6d-5A0A075B6B9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-5A0A075B6B9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav6d-5A0A075B6B9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-5A0A075B6B9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Reep4-203ENSMUST00000226563 1444 ntBASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Gm43060-201ENSMUST00000200621 289 ntBASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-5A0A075B6B9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-5A0A075B6B9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-5A0A075B6B9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-5A0A075B6B9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-5A0A075B6B9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-5A0A075B6B9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-5A0A075B6B9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-5A0A075B6B9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-5A0A075B6B9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.15□□□□□ -0.14
Trav6d-5A0A075B6B9 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms