Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Trav6n-6A0A075B6B2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-6A0A075B6B2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Gm7514-201ENSMUST00000209475 934 ntBASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-6A0A075B6B2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-6A0A075B6B2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms