Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gm6420-201ENSMUST00000193885 723 ntBASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15-2-dv6-2A0A075B650 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms