Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Gm6139-201ENSMUST00000079261 882 ntBASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Gm8309-201ENSMUST00000206627 1448 ntBASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13-2A0A075B649 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Gm37374-201ENSMUST00000194954 1829 ntBASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13-2A0A075B649 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Gm26917-202ENSMUST00000192833 3329 ntBASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Cdc34b-202ENSMUST00000188741 1252 ntBASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Gm45417-201ENSMUST00000209533 758 ntBASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-2A0A075B649 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Gm43060-201ENSMUST00000200621 289 ntBASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 CT010467.1-202ENSMUST00000205406 714 ntBASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Trav13-2A0A075B649 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms